STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000966265_01622Unannotated protein. (58 aa)    
Predicted Functional Partners:
GCA_000966265_02001
Unannotated protein.
   
   0.999
GCA_000966265_01621
Unannotated protein.
  
  
 0.980
GCA_000966265_00535
Unannotated protein.
 
   0.965
GCA_000966265_01032
Unannotated protein.
  
   0.960
GCA_000966265_00628
Unannotated protein.
  
   0.959
GCA_000966265_00689
Unannotated protein.
  
   0.947
GCA_000966265_01028
Unannotated protein.
  
   0.940
GCA_000966265_01919
Unannotated protein.
   
   0.940
GCA_000966265_01932
Unannotated protein.
  
   0.935
GCA_000966265_01009
Unannotated protein.
  
   0.933
Your Current Organism:
Palaeococcus ferrophilus
NCBI taxonomy Id: 588319
Other names: P. ferrophilus DSM 13482, Palaeococcus ferrophilus DMJ, Palaeococcus ferrophilus DSM 13482, Palaeococcus ferrophilus str. DSM 13482, Palaeococcus ferrophilus strain DSM 13482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.