STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_0024KEGG: cce:Ccel_0509 hypothetical protein. (353 aa)    
Predicted Functional Partners:
Cpap_0023
KEGG: cce:Ccel_0508 hypothetical protein.
 
     0.946
Cpap_0026
KEGG: cce:Ccel_0511 FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein.
 
    0.922
Cpap_0021
KEGG: ere:EUBREC_0045 hypothetical protein.
 
     0.902
Cpap_0017
KEGG: cce:Ccel_0502 hypothetical protein.
 
     0.882
Cpap_0025
PFAM: peptidase A24A prepilin type IV; KEGG: cce:Ccel_0510 peptidase A24A prepilin type IV.
 
     0.832
Cpap_0020
PFAM: Type II secretion system F domain; KEGG: cce:Ccel_0505 hypothetical protein.
 
     0.823
Cpap_0258
PFAM: Dockerin type 1; KEGG: cce:Ccel_0736 cellulosome protein dockerin type I.
  
  0.819
Cpap_1929
KEGG: bcg:BCG9842_B3621 hypothetical protein.
  
  0.814
Cpap_0019
KEGG: cce:Ccel_0504 Flp pilus assembly protein TadB-like protein.
 
     0.774
Cpap_0250
PFAM: cellulosome anchoring protein cohesin region; type 3a cellulose-binding domain protein; protein of unknown function DUF291; KEGG: cce:Ccel_0728 cellulosome anchoring protein cohesin region.
  
    0.767
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.