STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_0117Peptidoglycan glycosyltransferase; KEGG: cce:Ccel_2876 glycosyl transferase family 51; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase. (857 aa)    
Predicted Functional Partners:
Cpap_1073
KEGG: cce:Ccel_0478 penicillin-binding protein transpeptidase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PASTA domain containing protein; SMART: PASTA domain containing protein.
 
 0.975
Cpap_2661
TIGRFAM: penicillin-binding protein 2; KEGG: cce:Ccel_2560 penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain.
 
 
 0.918
Cpap_1399
PFAM: DivIVA family protein; KEGG: cce:Ccel_3443 DivIVA family protein.
   
 
 0.866
Cpap_1579
KEGG: cce:Ccel_0600 DivIVA family protein; TIGRFAM: DivIVA domain; PFAM: DivIVA family protein.
   
 
 0.866
Cpap_3394
PFAM: Cellulose synthase BcsB; KEGG: cdl:CDR20291_0887 putative cell wall anchored protein.
    
 
 0.863
Cpap_3151
Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: cce:Ccel_1749 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; Belongs to the peptidase S11 family.
   
 
 0.862
Cpap_1082
Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: cce:Ccel_0487 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; Belongs to the peptidase S11 family.
   
 
 0.842
Cpap_3526
PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: cce:Ccel_1370 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Belongs to the peptidase S11 family.
   
 
 0.842
Cpap_3680
PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: cce:Ccel_1486 penicillin-binding protein transpeptidase.
 
 
 0.842
Cpap_0040
PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: cce:Ccel_0520 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Belongs to the peptidase S11 family.
   
 
 0.825
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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