Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Cpap_0144 | Cpap_0146 | KEGG: cce:Ccel_2784 hypothetical protein. | KEGG: cce:Ccel_2782 hypothetical protein. | 0.896 |
Cpap_0144 | Cpap_0147 | KEGG: cce:Ccel_2784 hypothetical protein. | PFAM: SpoVG family protein; KEGG: cce:Ccel_2781 SpoVG family protein; Belongs to the SpoVG family. | 0.622 |
Cpap_0144 | Cpap_0148 | KEGG: cce:Ccel_2784 hypothetical protein. | KEGG: cce:Ccel_2780 hypothetical protein. | 0.801 |
Cpap_0144 | Cpap_0149 | KEGG: cce:Ccel_2784 hypothetical protein. | PFAM: peptidase A24A prepilin type IV; KEGG: cce:Ccel_2779 peptidase A24A prepilin type IV. | 0.838 |
Cpap_0144 | Cpap_0150 | KEGG: cce:Ccel_2784 hypothetical protein. | TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: cce:Ccel_2778 SAF domain protein; SMART: SAF domain protein. | 0.816 |
Cpap_0144 | Cpap_0151 | KEGG: cce:Ccel_2784 hypothetical protein. | KEGG: cce:Ccel_2777 hypothetical protein. | 0.833 |
Cpap_0144 | Cpap_0152 | KEGG: cce:Ccel_2784 hypothetical protein. | PFAM: type II secretion system protein E; KEGG: cce:Ccel_2776 type II secretion system protein E. | 0.802 |
Cpap_0144 | Cpap_0153 | KEGG: cce:Ccel_2784 hypothetical protein. | KEGG: cce:Ccel_2775 hypothetical protein. | 0.829 |
Cpap_0144 | Cpap_0154 | KEGG: cce:Ccel_2784 hypothetical protein. | KEGG: cce:Ccel_2774 hypothetical protein. | 0.811 |
Cpap_0144 | Cpap_0156 | KEGG: cce:Ccel_2784 hypothetical protein. | KEGG: cce:Ccel_2771 hypothetical protein. | 0.811 |
Cpap_0146 | Cpap_0144 | KEGG: cce:Ccel_2782 hypothetical protein. | KEGG: cce:Ccel_2784 hypothetical protein. | 0.896 |
Cpap_0146 | Cpap_0147 | KEGG: cce:Ccel_2782 hypothetical protein. | PFAM: SpoVG family protein; KEGG: cce:Ccel_2781 SpoVG family protein; Belongs to the SpoVG family. | 0.792 |
Cpap_0146 | Cpap_0148 | KEGG: cce:Ccel_2782 hypothetical protein. | KEGG: cce:Ccel_2780 hypothetical protein. | 0.892 |
Cpap_0146 | Cpap_0149 | KEGG: cce:Ccel_2782 hypothetical protein. | PFAM: peptidase A24A prepilin type IV; KEGG: cce:Ccel_2779 peptidase A24A prepilin type IV. | 0.882 |
Cpap_0146 | Cpap_0150 | KEGG: cce:Ccel_2782 hypothetical protein. | TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: cce:Ccel_2778 SAF domain protein; SMART: SAF domain protein. | 0.874 |
Cpap_0146 | Cpap_0151 | KEGG: cce:Ccel_2782 hypothetical protein. | KEGG: cce:Ccel_2777 hypothetical protein. | 0.878 |
Cpap_0146 | Cpap_0152 | KEGG: cce:Ccel_2782 hypothetical protein. | PFAM: type II secretion system protein E; KEGG: cce:Ccel_2776 type II secretion system protein E. | 0.873 |
Cpap_0146 | Cpap_0153 | KEGG: cce:Ccel_2782 hypothetical protein. | KEGG: cce:Ccel_2775 hypothetical protein. | 0.890 |
Cpap_0146 | Cpap_0154 | KEGG: cce:Ccel_2782 hypothetical protein. | KEGG: cce:Ccel_2774 hypothetical protein. | 0.887 |
Cpap_0146 | Cpap_0156 | KEGG: cce:Ccel_2782 hypothetical protein. | KEGG: cce:Ccel_2771 hypothetical protein. | 0.862 |
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