STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_0164KEGG: hmo:HM1_0602 hypothetical protein. (196 aa)    
Predicted Functional Partners:
Cpap_0163
KEGG: cce:Ccel_2755 hypothetical protein.
 
     0.964
Cpap_0160
KEGG: cce:Ccel_2764 hypothetical protein.
 
     0.932
Cpap_0162
DNA-cytosine methyltransferase; KEGG: dsy:DSY0044 hypothetical protein; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
 
     0.931
Cpap_0165
KEGG: cce:Ccel_2753 hypothetical protein.
     0.910
Cpap_0159
KEGG: ckr:CKR_3426 hypothetical protein.
 
     0.903
Cpap_0166
KEGG: cce:Ccel_2752 hypothetical protein.
 
     0.863
Cpap_0158
KEGG: cce:Ccel_2769 hypothetical protein.
 
     0.861
Cpap_0169
KEGG: cce:Ccel_2748 hypothetical protein.
 
     0.852
Cpap_0170
KEGG: cce:Ccel_2747 hypothetical protein.
 
     0.842
Cpap_0157
KEGG: cce:Ccel_2770 hypothetical protein.
 
     0.839
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.