STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_0278PFAM: Patatin; KEGG: tjr:TherJR_2186 patatin. (329 aa)    
Predicted Functional Partners:
Cpap_0277
PFAM: Protein of unknown function DUF2179; protein of unknown function DUF161; KEGG: tte:TTE2701 hypothetical protein.
       0.566
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 0.553
Cpap_3421
KEGG: cce:Ccel_1316 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase.
     
 0.545
Cpap_1561
Phospholipase D/Transphosphatidylase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
     
 0.533
Cpap_4239
KEGG: cce:Ccel_2227 platelet-activating factor acetylhydrolase plasma/intracellular isoform II.
     
 0.530
Cpap_3775
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: gym:GYMC10_0788 glycerophosphoryl diester phosphodiesterase.
     
 0.515
Cpap_0276
KEGG: mae:Maeo_0645 hypothetical protein.
       0.484
Cpap_2723
KEGG: cce:Ccel_2592 hypothetical protein.
  
  
  0.465
Cpap_1138
PFAM: copper amine oxidase-like domain-containing protein; Tetratricopeptide TPR_1 repeat-containing protein; KEGG: cce:Ccel_2335 copper amine oxidase domain protein.
  
  
  0.414
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.