STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_0285PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: dat:HRM2_43030 HgdA. (446 aa)    
Predicted Functional Partners:
Cpap_0284
PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: dat:HRM2_43040 HgdB1.
 
 
 0.999
Cpap_2583
TIGRFAM: CoA-substrate-specific enzyme activase; KEGG: dal:Dalk_0251 CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type.
 
 0.968
Cpap_2605
CoA-substrate-specific enzyme activase; KEGG: cbb:CLD_2999 2-hydroxyglutaryl-CoA dehydratase component A; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; Ribosomal protein L9-like.
 
 0.959
Cpap_1804
PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: bpu:BPUM_0635 acyl-CoA dehydrogenase (NADP(+)).
 
  
 0.823
Cpap_4255
KEGG: cce:Ccel_2218 CoA-substrate-specific enzyme activase; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type.
 
 0.785
Cpap_0286
Radical SAM domain protein; KEGG: tjr:TherJR_2454 oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB.
       0.773
Cpap_2948
KEGG: cce:Ccel_1945 CoA-substrate-specific enzyme activase; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: Protein of unknown function DUF2229, CoA enzyme activase; ATPase BadF/BadG/BcrA/BcrD type.
 
 0.718
Cpap_0283
PFAM: Beta-ketoacyl synthase; KR domain protein; phosphopantetheine-binding; KEGG: bay:RBAM_016990 BaeL.
       0.702
Cpap_0282
Hypothetical protein; KEGG: bbe:BBR47_39880 putative polyketide synthase.
       0.669
Cpap_0281
Hypothetical protein; KEGG: cce:Ccel_0862 beta-ketoacyl synthase.
       0.573
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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