STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_0341KEGG: cce:Ccel_2923 hypothetical protein. (176 aa)    
Predicted Functional Partners:
Cpap_0340
Transcriptional modulator of MazE/toxin, MazF; Toxic component of a type II toxin-antitoxin (TA) system.
       0.784
Cpap_0339
KEGG: cce:Ccel_2925 putative transcriptional regulator, CopG family.
 
     0.776
Cpap_2343
Ig-like, group 2; KEGG: cce:Ccel_3406 Ig-like, group 2.
 
     0.762
Cpap_1961
PFAM: S-layer domain-containing protein; KEGG: cce:Ccel_0289 S-layer domain protein.
  
     0.761
Cpap_1538
PFAM: copper amine oxidase-like domain-containing protein; KEGG: amt:Amet_1655 hypothetical protein.
  
     0.758
Cpap_0333
KEGG: cce:Ccel_2931 hypothetical protein.
 
     0.755
Cpap_3893
PFAM: copper amine oxidase-like domain-containing protein; KEGG: cce:Ccel_1126 copper amine oxidase domain protein.
  
     0.754
Cpap_4000
PFAM: copper amine oxidase-like domain-containing protein; KEGG: dae:Dtox_4298 copper amine oxidase domain protein.
  
     0.746
Cpap_0448
PFAM: copper amine oxidase-like domain-containing protein; KEGG: cpo:COPRO5265_0075 anion ABC transporter, anion-binding protein.
  
     0.745
Cpap_0005
PFAM: copper amine oxidase-like domain-containing protein; KEGG: lsp:Bsph_3063 hypothetical protein.
  
     0.741
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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