STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_0343Glycosyl transferase, WecB/TagA/CpsF family; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid. (247 aa)    
Predicted Functional Partners:
Cpap_0388
KEGG: cce:Ccel_2883 polysaccharide pyruvyl transferase; TIGRFAM: polysaccharide pyruvyl transferase CsaB; PFAM: glycosyl transferase group 1.
 
 0.870
Cpap_1917
KEGG: cce:Ccel_0262 UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; Glycosyl transferase, family 4, conserved region; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
  
 0.841
Cpap_3183
KEGG: cce:Ccel_1717 cell envelope-related transcriptional attenuator; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator.
 
   
 0.598
Cpap_1650
KEGG: cce:Ccel_0666 cell envelope-related transcriptional attenuator; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator.
 
   
 0.597
Cpap_0344
PFAM: Protein of unknown function DUF2179; protein of unknown function DUF161; KEGG: cce:Ccel_2920 protein of unknown function DUF161.
       0.543
Cpap_0331
PFAM: O-antigen polymerase; KEGG: cce:Ccel_2933 O-antigen polymerase.
 
   
 0.506
Cpap_2004
PFAM: glycosyl transferase family 2; KEGG: cce:Ccel_0333 glycosyl transferase family 2.
   
 0.506
Cpap_1950
PFAM: S-layer domain-containing protein; KEGG: cce:Ccel_0278 S-layer domain protein.
  
     0.494
Cpap_0334
PFAM: glycosyl transferase group 1; KEGG: cce:Ccel_2930 TPR/glycosyl transferase domain-containing protein.
  
 
 0.485
mraY
phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
   
 
 0.483
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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