STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_0406KEGG: cce:Ccel_0532 hypothetical protein. (134 aa)    
Predicted Functional Partners:
Cpap_2990
PFAM: Sporulation stage III protein AF; KEGG: cce:Ccel_1911 hypothetical protein.
  
    0.791
Cpap_2251
KEGG: cce:Ccel_0172 hypothetical protein.
  
     0.766
Cpap_1951
PFAM: protein of unknown function DUF1779; KEGG: cce:Ccel_0279 protein of unknown function DUF1779.
  
     0.752
Cpap_1574
KEGG: cce:Ccel_0595 hypothetical protein.
  
     0.732
Cpap_2150
KEGG: cce:Ccel_0079 hypothetical protein.
  
     0.712
Cpap_2102
Peptidoglycan-binding lysin domain; KEGG: cce:Ccel_0021 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM.
  
    0.710
Cpap_1960
PFAM: S-layer domain-containing protein; KEGG: cce:Ccel_0288 hypothetical protein.
  
     0.708
Cpap_0407
KEGG: cce:Ccel_0533 hypothetical protein.
       0.700
Cpap_0405
KEGG: cce:Ccel_0531 preprotein translocase, YajC subunit; TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein.
       0.680
Cpap_2992
KEGG: cce:Ccel_1909 hypothetical protein.
  
    0.664
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.