STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_0428KEGG: tit:Thit_1346 hypothetical protein. (235 aa)    
Predicted Functional Partners:
Cpap_0425
PFAM: DNA methylase N-4/N-6 domain protein; KEGG: tit:Thit_1349 DNA methylase N-4/N-6 domain protein.
 
     0.964
Cpap_0427
PFAM: PglZ domain protein; KEGG: tpd:Teth39_0929 alkaline phosphatase domain-containing protein.
 
     0.962
Cpap_0426
SNF2-related protein; KEGG: tpd:Teth39_0928 helicase domain-containing protein; PFAM: SNF2-related protein; helicase domain protein; SMART: helicase domain protein; DEAD-like helicase.
 
     0.956
Cpap_0424
KEGG: tit:Thit_1350 hypothetical protein.
 
     0.951
Cpap_0423
PFAM: AAA ATPase central domain protein; KEGG: tit:Thit_1351 hypothetical protein.
 
     0.946
Cpap_3679
PFAM: GCN5-related N-acetyltransferase; KEGG: cbk:CLL_A2294 GnaT-family acetyltransferase.
  
     0.501
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.