STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_0448PFAM: copper amine oxidase-like domain-containing protein; KEGG: cpo:COPRO5265_0075 anion ABC transporter, anion-binding protein. (380 aa)    
Predicted Functional Partners:
Cpap_0574
PFAM: S-layer domain-containing protein; KEGG: cce:Ccel_2633 S-layer domain protein.
  
     0.770
Cpap_1183
PFAM: S-layer domain-containing protein; KEGG: cth:Cthe_2809 glycoside hydrolase family protein.
  
     0.770
Cpap_0867
PFAM: S-layer domain-containing protein; KEGG: cce:Ccel_2633 S-layer domain protein.
  
     0.769
Cpap_1538
PFAM: copper amine oxidase-like domain-containing protein; KEGG: amt:Amet_1655 hypothetical protein.
  
     0.767
Cpap_1750
KEGG: dae:Dtox_0436 S-layer domain protein; PFAM: SH3 type 3 domain protein; S-layer domain-containing protein; SMART: SH3 domain protein.
  
     0.760
Cpap_1961
PFAM: S-layer domain-containing protein; KEGG: cce:Ccel_0289 S-layer domain protein.
  
     0.760
Cpap_1950
PFAM: S-layer domain-containing protein; KEGG: cce:Ccel_0278 S-layer domain protein.
  
     0.758
Cpap_4048
KEGG: cce:Ccel_2364 S-layer domain protein; PFAM: S-layer domain-containing protein; Ig domain protein group 2 domain protein; SMART: Ig domain protein group 2 domain protein; Fibronectin type III domain protein.
  
     0.757
Cpap_3533
PFAM: S-layer domain-containing protein; copper amine oxidase-like domain-containing protein; KEGG: cce:Ccel_1376 S-layer domain protein.
  
     0.753
Cpap_2121
PFAM: S-layer domain-containing protein; KEGG: cce:Ccel_0039 S-layer domain protein.
  
     0.747
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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