STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_0474Hypothetical protein; Manually curated; KEGG: rmr:Rmar_2906 hypothetical protein. (1503 aa)    
Predicted Functional Partners:
Cpap_2455
KEGG: cpy:Cphy_1217 hypothetical protein.
  
     0.709
Cpap_0974
PFAM: GCN5-related N-acetyltransferase; KEGG: cce:Ccel_1539 GCN5-related N-acetyltransferase.
  
     0.522
Cpap_0326
PFAM: heat shock protein Hsp20; KEGG: cce:Ccel_2938 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family.
    
 
 0.498
Cpap_2313
Manually curated; TIGRFAM: arsenite-activated ATPase ArsA; KEGG: cpy:Cphy_1698 arsenite-transporting ATPase.
    
 
 0.498
Cpap_3975
PFAM: heat shock protein Hsp20; KEGG: cth:Cthe_0037 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family.
    
 
 0.498
Cpap_4219
PFAM: mobilisation protein; KEGG: cth:Cthe_3236 hypothetical protein.
  
    0.455
Cpap_0148
KEGG: cce:Ccel_2780 hypothetical protein.
  
     0.419
Cpap_3858
KEGG: cce:Ccel_1104 hypothetical protein.
  
   
 0.418
Cpap_0473
KEGG: ele:Elen_0819 hypothetical protein.
       0.403
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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