STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_0520KEGG: cce:Ccel_0886 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component. (210 aa)    
Predicted Functional Partners:
Cpap_0519
KEGG: cce:Ccel_0885 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor.
 0.999
Cpap_0521
KEGG: cce:Ccel_0887 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 0.998
Cpap_2719
KEGG: cce:Ccel_2589 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3.
 0.987
Cpap_1738
KEGG: tpd:Teth39_1763 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 0.957
Cpap_2717
KEGG: cce:Ccel_2587 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 0.957
Cpap_0562
KEGG: cag:Cagg_0335 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 0.956
Cpap_1736
PFAM: extracellular solute-binding protein family 3; KEGG: dsa:Desal_3319 extracellular solute-binding protein family 3.
 0.906
Cpap_0560
KEGG: rca:Rcas_1455 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.
 
0.830
Cpap_0559
Extracellular solute-binding protein family 3; KEGG: rlg:Rleg_1760 cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3.
 
 0.727
accD
acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
   
   0.573
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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