STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_0631TIGRFAM: flagellar operon protein; KEGG: cce:Ccel_2043 flagellar operon protein. (133 aa)    
Predicted Functional Partners:
Cpap_0630
Fagellar hook-basal body protein; KEGG: cce:Ccel_2042 protein of unknown function DUF1078 domain protein; TIGRFAM: fagellar hook-basal body protein; PFAM: flagellar basal body FlaE domain protein; protein of unknown function DUF1078 domain protein; flagellar basal body rod protein.
 
    0.902
Cpap_0633
PFAM: Flagellar hook-length control protein-like, C-terminal domain; KEGG: cce:Ccel_2045 flagellar hook-length control protein.
 
    0.897
Cpap_0632
Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.
  
    0.847
Cpap_0634
Hypothetical protein; Manually curated; KEGG: cce:Ccel_2046 hypothetical protein.
 
    0.787
Cpap_0637
PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: cce:Ccel_2049 flagellar assembly protein FliH.
 
    0.766
Cpap_0626
CheC, inhibitor of MCP methylation / FliN fusion protein; KEGG: cce:Ccel_2038 flagellar motor switch protein; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein.
 
    0.756
Cpap_0635
KEGG: cce:Ccel_2047 flagellar export protein FliJ; TIGRFAM: flagellar export protein FliJ; PFAM: flagellar export FliJ family protein.
 
    0.755
Cpap_0612
PFAM: CheC domain protein; KEGG: cce:Ccel_2025 CheC, inhibitor of MCP methylation.
 
     0.752
Cpap_0641
KEGG: cce:Ccel_2053 flagellar basal-body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
 
    0.752
Cpap_0627
KEGG: cce:Ccel_2039 flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein.
 
    0.742
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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