STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_0726PFAM: 3-dehydroquinate synthase; KEGG: cce:Ccel_2486 3-dehydroquinate synthase. (353 aa)    
Predicted Functional Partners:
Cpap_0725
KEGG: cce:Ccel_2487 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; TIGRFAM: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: HAD-superfamily hydrolase subfamily IB hypothetical 1.
 
    0.873
gpsA
PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: cce:Ccel_2129 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
    
 0.842
Cpap_2880
PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: sat:SYN_02446 glycerol-3-phosphate dehydrogenase.
  
  
  0.801
Cpap_1717
KEGG: cce:Ccel_1638 dihydroxyacetone kinase, L subunit; TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase.
  
 
 0.777
Cpap_3421
KEGG: cce:Ccel_1316 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase.
     
 0.748
Cpap_1716
KEGG: cce:Ccel_1639 Dak kinase; PFAM: Dak kinase.
  
 
 0.707
Cpap_4061
Dihydroxyacetone kinase, DhaK subunit; PFAM: Dak kinase; Dak phosphatase; manually curated; KEGG: cbb:CLD_3590 dihydroxyacetone kinase; TIGRFAM: dihydroxyacetone kinase, DhaK subunit; dihydroxyacetone kinase, L subunit.
  
 
 0.707
Cpap_2348
PFAM: iron-containing alcohol dehydrogenase; Aldehyde Dehydrogenase; KEGG: cpe:CPE2531 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.697
Cpap_2505
PFAM: iron-containing alcohol dehydrogenase; Aldehyde Dehydrogenase; KEGG: cce:Ccel_3198 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.697
Cpap_3718
KEGG: bbe:BBR47_39880 putative polyketide synthase; PFAM: Beta-ketoacyl synthase; KR domain protein; phosphopantetheine-binding.
   
 
 0.679
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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