STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_0749PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cth:Cthe_2125 binding-protein-dependent transport systems inner membrane component. (280 aa)    
Predicted Functional Partners:
Cpap_0354
KEGG: cce:Ccel_2909 ABC transporter related; PFAM: ABC transporter related; TOBE domain-containing protein; SMART: AAA ATPase.
 
 0.960
Cpap_0748
KEGG: amt:Amet_4743 binding-protein-dependent transport systems inner membrane component.
 
 0.955
Cpap_0482
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gtn:GTNG_1793 L-arabinose transport system (permease).
  
 0.917
Cpap_0700
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cce:Ccel_2111 binding-protein-dependent transport systems inner membrane component.
  
 0.909
Cpap_3505
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oih:OB0775 sugar ABC transporter permease.
  
 0.909
Cpap_3554
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cce:Ccel_0999 binding-protein-dependent transport systems inner membrane component.
  
 0.909
Cpap_3768
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cac:CA_C0427 glycerol-3-phosphate ABC-transporter, permease component.
  
 0.909
Cpap_3901
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cce:Ccel_1134 binding-protein-dependent transport systems inner membrane component.
  
 0.909
Cpap_4073
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hor:Hore_13130 binding-protein-dependent transport systems inner membrane component.
  
 0.909
Cpap_1208
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ate:Athe_2375 binding-protein-dependent transport systems inner membrane component.
  
 0.908
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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