STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_0766PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cce:Ccel_2457 binding-protein-dependent transport systems inner membrane component. (307 aa)    
Predicted Functional Partners:
Cpap_0767
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cce:Ccel_2456 binding-protein-dependent transport systems inner membrane component.
 
 0.986
Cpap_0765
PFAM: extracellular solute-binding protein family 1; KEGG: cce:Ccel_2458 extracellular solute-binding protein family 1.
 
 0.955
Cpap_0354
KEGG: cce:Ccel_2909 ABC transporter related; PFAM: ABC transporter related; TOBE domain-containing protein; SMART: AAA ATPase.
 
 0.943
Cpap_2222
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cce:Ccel_0143 binding-protein-dependent transport systems inner membrane component.
 
 0.941
Cpap_2230
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cce:Ccel_0151 binding-protein-dependent transport systems inner membrane component.
 
 0.941
Cpap_3327
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cce:Ccel_1253 binding-protein-dependent transport systems inner membrane component.
 
 0.941
Cpap_0482
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gtn:GTNG_1793 L-arabinose transport system (permease).
  
 0.908
Cpap_1208
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ate:Athe_2375 binding-protein-dependent transport systems inner membrane component.
  
 0.903
Cpap_0700
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cce:Ccel_2111 binding-protein-dependent transport systems inner membrane component.
  
 0.899
Cpap_3505
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oih:OB0775 sugar ABC transporter permease.
  
 0.898
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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