STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_0782Manually curated; TIGRFAM: ammonium transporter; KEGG: tjr:TherJR_0705 ammonium transporter; PFAM: ammonium transporter. (524 aa)    
Predicted Functional Partners:
Cpap_0780
PFAM: nitrogen regulatory protein P-II; KEGG: tit:Thit_1273 nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
 0.994
Cpap_0801
PFAM: nitrogen regulatory protein P-II; KEGG: cbe:Cbei_5033 nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
 0.957
Cpap_3567
PFAM: nitrogen regulatory protein P-II; KEGG: cts:Ctha_0406 nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
 
 0.918
Cpap_0913
PFAM: nitrogen regulatory protein P-II; KEGG: cbe:Cbei_2001 nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
 
 0.869
Cpap_0912
PFAM: nitrogen regulatory protein P-II; KEGG: cbe:Cbei_2000 nitrogen regulatory protein P-II.
 
 0.858
Cpap_2125
Ammonium transporter; KEGG: eel:EUBELI_00740 guanylate cyclase; TIGRFAM: ammonium transporter; PFAM: ammonium transporter; nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
 
0.853
Cpap_0781
KEGG: tjr:TherJR_0704 hypothetical protein.
       0.636
Cpap_2030
Integral membrane sensor signal transduction histidine kinase; KEGG: cce:Ccel_0361 histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
  
 0.508
Cpap_0934
KEGG: cce:Ccel_2176 aconitate hydratase; TIGRFAM: aconitate hydratase; PFAM: aconitate hydratase domain-containing protein.
  
 
 0.484
nifH
Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
   
  
 0.479
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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