STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_0799KEGG: dhd:Dhaf_0995 response regulator receiver and ANTAR domain protein; PFAM: ANTAR domain protein; response regulator receiver; SMART: response regulator receiver. (189 aa)    
Predicted Functional Partners:
Cpap_0798
TIGRFAM: glutamine synthetase, type I; KEGG: dhd:Dhaf_0994 glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp.
 
  
 0.820
Cpap_3374
KEGG: cce:Ccel_1278 uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrinogen III synthase HEM4; Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase.
  
 
 0.790
nifH
Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
   
  
 0.789
Cpap_0796
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cth:Cthe_0200 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
  
 0.763
Cpap_0797
PFAM: glutamate synthase alpha subunit domain protein; KEGG: cth:Cthe_0201 glutamate synthase (NADPH) GltB3 subunit.
 
  
 0.761
Cpap_0793
PFAM: glutamine amidotransferase class-II; KEGG: cth:Cthe_0197 glutamate synthase (NADPH) GltB1 subunit.
 
   
 0.748
Cpap_0794
KEGG: cth:Cthe_0198 glutamate synthase (NADPH) GltB2 subunit; PFAM: ferredoxin-dependent glutamate synthase.
 
     0.712
Cpap_2125
Ammonium transporter; KEGG: eel:EUBELI_00740 guanylate cyclase; TIGRFAM: ammonium transporter; PFAM: ammonium transporter; nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
 
  
 0.693
Cpap_0795
KEGG: cth:Cthe_0199 4Fe-4S ferredoxin, iron-sulfur binding.
 
     0.667
Cpap_0800
KEGG: cbe:Cbei_5034 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter.
  
  
 0.620
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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