STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_0862KEGG: cce:Ccel_0119 hypothetical protein. (51 aa)    
Predicted Functional Partners:
Cpap_0863
KEGG: cce:Ccel_0120 hypothetical protein.
       0.752
Cpap_0864
KEGG: cce:Ccel_0121 hypothetical protein.
       0.752
Cpap_0865
Hypothetical protein; KEGG: bhy:BHWA1_01429 putative metal-dependant phosphohydrolase.
       0.752
Cpap_0861
KEGG: cce:Ccel_0118 hypothetical protein.
       0.701
Cpap_0860
KEGG: aac:Aaci_2249 hypothetical protein.
       0.554
Cpap_0866
KEGG: lca:LSEI_0550 holin-like toxin.
       0.483
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.