STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_0945PFAM: lipolytic protein G-D-S-L family; KEGG: cce:Ccel_2162 lipolytic protein G-D-S-L family. (437 aa)    
Predicted Functional Partners:
Cpap_2846
PFAM: glycoside hydrolase family 5; Dockerin type 1; KEGG: cce:Ccel_0840 glycoside hydrolase family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 0.938
Cpap_1636
Hypothetical protein; Manually curated; KEGG: ttu:TERTU_4677 hypothetical protein.
  
 
  0.925
Cpap_0272
PFAM: Dockerin type 1; KEGG: cce:Ccel_0752 glycoside hydrolase family 26; Belongs to the glycosyl hydrolase 26 family.
 
  
 0.918
Cpap_1788
Mannan endo-1,4-beta-mannosidase; KEGG: cce:Ccel_1551 glycoside hydrolase family 26; PFAM: Dockerin type 1; Belongs to the glycosyl hydrolase 26 family.
 
  
 0.915
Cpap_0258
PFAM: Dockerin type 1; KEGG: cce:Ccel_0736 cellulosome protein dockerin type I.
  
 
  0.900
Cpap_0273
PFAM: glycoside hydrolase family 9; Dockerin type 1; KEGG: cce:Ccel_0753 glycoside hydrolase family 9; Belongs to the glycosyl hydrolase 9 (cellulase E) family.
  
 0.893
Cpap_0254
PFAM: glycoside hydrolase family 9; Carbohydrate-binding CenC domain protein; Dockerin type 1; KEGG: cce:Ccel_0732 glycoside hydrolase family 9.
 
 0.885
Cpap_3323
PFAM: glycoside hydrolase family 9; Dockerin type 1; KEGG: cce:Ccel_1249 glycoside hydrolase family 9.
  
 0.884
Cpap_0952
KEGG: slp:Slip_1811 fibronectin type III domain protein; PFAM: Kelch repeat type 1-containing protein; Fibronectin type III domain protein; SMART: Kelch repeat type 1-containing protein; Fibronectin type III domain protein.
 
 
  0.881
Cpap_0259
PFAM: glycoside hydrolase family 9; Dockerin type 1; KEGG: cce:Ccel_0737 glycoside hydrolase family 9; Belongs to the glycosyl hydrolase 9 (cellulase E) family.
  
 0.878
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.