STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_0952KEGG: slp:Slip_1811 fibronectin type III domain protein; PFAM: Kelch repeat type 1-containing protein; Fibronectin type III domain protein; SMART: Kelch repeat type 1-containing protein; Fibronectin type III domain protein. (1279 aa)    
Predicted Functional Partners:
Cpap_0953
KEGG: cce:Ccel_2153 YD repeat protein; TIGRFAM: YD repeat protein; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; YD repeat-containing protein; Belongs to the peptidase S8 family.
 
 0.931
Cpap_0945
PFAM: lipolytic protein G-D-S-L family; KEGG: cce:Ccel_2162 lipolytic protein G-D-S-L family.
 
 
  0.881
Cpap_3849
PFAM: glycoside hydrolase family 5; Dockerin type 1; KEGG: cce:Ccel_1099 glycoside hydrolase family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 
  0.855
Cpap_3071
KEGG: ate:Athe_0012 YD repeat protein; TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein.
 
 0.838
Cpap_3070
PFAM: YD repeat-containing protein; KEGG: lmh:LMHCC_2776 YD repeat protein.
 
 0.819
Cpap_1929
KEGG: bcg:BCG9842_B3621 hypothetical protein.
  
     0.712
Cpap_0258
PFAM: Dockerin type 1; KEGG: cce:Ccel_0736 cellulosome protein dockerin type I.
  
     0.709
Cpap_2177
KEGG: cce:Ccel_0108 kelch repeat protein; PFAM: Kelch repeat type 1-containing protein; SMART: Kelch repeat type 1-containing protein.
  
  
 
0.708
Cpap_1422
KEGG: amd:AMED_7297 rhs family protein.
  
  
  0.703
Cpap_0024
KEGG: cce:Ccel_0509 hypothetical protein.
  
  0.692
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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