STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_1029TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; KEGG: cce:Ccel_0438 carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane. (663 aa)    
Predicted Functional Partners:
Cpap_2096
KEGG: cce:Ccel_0016 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain.
    
 0.936
Cpap_3931
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: cce:Ccel_1164 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain.
    
 0.930
Cpap_1028
KEGG: cce:Ccel_0437 extracellular solute-binding protein family 3.
 
  
 0.894
Cpap_1026
KEGG: cce:Ccel_0435 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    0.811
Cpap_0796
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cth:Cthe_0200 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.808
Cpap_0345
TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; KEGG: cce:Ccel_2918 carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane.
  
  
 
0.796
Cpap_2812
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; KEGG: clj:CLJU_c30260 putative oxidoreductase.
    
 0.783
Cpap_1027
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cce:Ccel_0436 binding-protein-dependent transport systems inner membrane component.
 
    0.777
Cpap_1704
PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: cth:Cthe_2541 nitrite and sulphite reductase 4Fe-4S region.
  
  
 0.760
Cpap_3487
PFAM: formylmethanofuran dehydrogenase subunit E region; KEGG: cdl:CDR20291_0172 hypothetical protein.
  
  
  0.757
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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