Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cpap_1065 | Cpap_1066 | Cpap_1065 | Cpap_1066 | KEGG: cce:Ccel_0470 hypothetical protein. | PFAM: peptidase M16 domain protein; KEGG: cce:Ccel_0471 peptidase M16 domain protein. | 0.512 |
Cpap_1065 | Cpap_1067 | Cpap_1065 | Cpap_1067 | KEGG: cce:Ccel_0470 hypothetical protein. | PFAM: peptidase M16 domain protein; KEGG: cce:Ccel_0472 peptidase M16 domain protein. | 0.460 |
Cpap_1065 | lgt | Cpap_1065 | Cpap_1068 | KEGG: cce:Ccel_0470 hypothetical protein. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.419 |
Cpap_1066 | Cpap_1065 | Cpap_1066 | Cpap_1065 | PFAM: peptidase M16 domain protein; KEGG: cce:Ccel_0471 peptidase M16 domain protein. | KEGG: cce:Ccel_0470 hypothetical protein. | 0.512 |
Cpap_1066 | Cpap_1067 | Cpap_1066 | Cpap_1067 | PFAM: peptidase M16 domain protein; KEGG: cce:Ccel_0471 peptidase M16 domain protein. | PFAM: peptidase M16 domain protein; KEGG: cce:Ccel_0472 peptidase M16 domain protein. | 0.972 |
Cpap_1066 | lgt | Cpap_1066 | Cpap_1068 | PFAM: peptidase M16 domain protein; KEGG: cce:Ccel_0471 peptidase M16 domain protein. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.743 |
Cpap_1067 | Cpap_1065 | Cpap_1067 | Cpap_1065 | PFAM: peptidase M16 domain protein; KEGG: cce:Ccel_0472 peptidase M16 domain protein. | KEGG: cce:Ccel_0470 hypothetical protein. | 0.460 |
Cpap_1067 | Cpap_1066 | Cpap_1067 | Cpap_1066 | PFAM: peptidase M16 domain protein; KEGG: cce:Ccel_0472 peptidase M16 domain protein. | PFAM: peptidase M16 domain protein; KEGG: cce:Ccel_0471 peptidase M16 domain protein. | 0.972 |
Cpap_1067 | lgt | Cpap_1067 | Cpap_1068 | PFAM: peptidase M16 domain protein; KEGG: cce:Ccel_0472 peptidase M16 domain protein. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.807 |
lgt | Cpap_1065 | Cpap_1068 | Cpap_1065 | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | KEGG: cce:Ccel_0470 hypothetical protein. | 0.419 |
lgt | Cpap_1066 | Cpap_1068 | Cpap_1066 | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | PFAM: peptidase M16 domain protein; KEGG: cce:Ccel_0471 peptidase M16 domain protein. | 0.743 |
lgt | Cpap_1067 | Cpap_1068 | Cpap_1067 | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | PFAM: peptidase M16 domain protein; KEGG: cce:Ccel_0472 peptidase M16 domain protein. | 0.807 |