STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_1087PFAM: SpoVR family protein; KEGG: cce:Ccel_0491 SpoVR family protein. (462 aa)    
Predicted Functional Partners:
Cpap_1085
KEGG: cce:Ccel_0489 putative serine protein kinase, PrkA; PFAM: PrkA AAA domain protein; PrkA serine kinase; SMART: PrkA AAA domain protein.
 
  
 0.996
Cpap_1086
Sporulation protein YhbH; KEGG: cce:Ccel_0490 hypothetical protein; TIGRFAM: sporulation protein YhbH; PFAM: protein of unknown function DUF444; Belongs to the UPF0229 family.
 
  
 0.996
Cpap_1088
KEGG: cce:Ccel_0492 heat shock protein 90; PFAM: Heat shock protein Hsp90-like; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
       0.498
Cpap_3148
TIGRFAM: stage II sporulation protein M; KEGG: cce:Ccel_1752 stage II sporulation protein M.
  
   
 0.449
Cpap_2529
TIGRFAM: sporulation transcriptional regulator SpoIIID; KEGG: cbt:CLH_0496 sporulation transcriptional regulator spoiiid.
   
  
 0.445
Cpap_1084
PFAM: transcriptional regulator PadR family protein; KEGG: ere:EUBREC_1374 hypothetical protein.
       0.411
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
   
    0.400
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.