STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_1150TIGRFAM: bacteriocin biosynthesis cyclodehydratase, SagC family; KEGG: cbf:CLI_0568 streptolysin associated protein SagC. (368 aa)    
Predicted Functional Partners:
Cpap_1151
PFAM: protein of unknown function DUF181; KEGG: cbl:CLK_3700 streptolysin associated protein SagD.
     
 0.830
Cpap_1152
PFAM: Abortive infection protein; KEGG: cbf:CLI_0570 CAAX amino terminal protease family protein.
     
 0.830
Cpap_1149
SagB-type dehydrogenase domain; KEGG: cby:CLM_0573 streptolysin associated protein SagB; TIGRFAM: SagB-type dehydrogenase domain; PFAM: nitroreductase.
     
 0.791
Cpap_1153
PFAM: Abortive infection protein; KEGG: bhy:BHWA1_02357 hypothetical protein.
       0.722
Cpap_1154
KEGG: sus:Acid_6967 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
     
 0.428
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.