STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_1173PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: str:Sterm_3347 phosphotransferase system PTS lactose/cellobiose-specific IIA subunit. (102 aa)    
Predicted Functional Partners:
Cpap_1174
PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: cbe:Cbei_4538 phosphotransferase system, lactose/cellobiose-specific IIB subunit.
 
 0.999
Cpap_1175
PTS system, cellobiose-specific IIC subunit; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
 
 0.999
Cpap_1170
Transcriptional antiterminator, BglG; KEGG: cbi:CLJ_B2357 putative PRD domain protein/PTS system, L-ascorbate family, IIA component; PFAM: PRD domain protein; M trans-acting positive regulator.
 
 
 0.969
Cpap_2043
TIGRFAM: beta-galactosidase; KEGG: cce:Ccel_0374 beta-galactosidase; PFAM: glycoside hydrolase family 1.
 
 
 0.969
Cpap_1178
PFAM: glycoside hydrolase family 4; KEGG: tte:TTE0337 alpha-galactosidase/6-phospho-beta-glucosidase.
 
 
 0.956
Cpap_1172
KEGG: lpa:lpa_00730 sugar transport PTS system phosphocarrier HPr protein; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr.
   
 0.951
Cpap_2784
Transcriptional antiterminator, BglG; KEGG: bld:BLi04090 LicR.
 
 
 0.929
Cpap_1179
PFAM: protein of unknown function DUF871; KEGG: cbi:CLJ_B1463 outer surface protein.
 
    0.901
Cpap_4204
PFAM: phosphoryl transfer system HPr; KEGG: cce:Ccel_2245 HPrNtr domain-containing protein.
   
 0.890
Cpap_1317
Phosphotransferase system, phosphocarrier protein HPr; KEGG: cce:Ccel_0806 phosphocarrier, HPr family; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr.
   
 0.860
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.