STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_1180KEGG: efa:EF1014 hypothetical protein. (73 aa)    
Predicted Functional Partners:
Cpap_1179
PFAM: protein of unknown function DUF871; KEGG: cbi:CLJ_B1463 outer surface protein.
       0.646
Cpap_1181
PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; KEGG: rrs:RoseRS_1246 nucleotidyl transferase.
       0.636
Cpap_1176
PFAM: RDD domain containing protein; KEGG: emi:Emin_0171 RDD domain-containing protein.
       0.590
Cpap_1177
N-acetylglucosamine kinase; KEGG: cac:CA_C0183 NagC/XylR family transcriptional regulators; PFAM: ATPase BadF/BadG/BcrA/BcrD type.
       0.590
Cpap_1178
PFAM: glycoside hydrolase family 4; KEGG: tte:TTE0337 alpha-galactosidase/6-phospho-beta-glucosidase.
       0.590
Cpap_1182
PFAM: sugar isomerase (SIS); KEGG: bcl:ABC0492 hypothetical protein.
       0.439
Cpap_1183
PFAM: S-layer domain-containing protein; KEGG: cth:Cthe_2809 glycoside hydrolase family protein.
       0.439
Cpap_1175
PTS system, cellobiose-specific IIC subunit; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
       0.433
Cpap_1184
KEGG: sli:Slin_6607 hypothetical protein.
       0.417
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.