STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_1210PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: csc:Csac_0599 oxidoreductase domain-containing protein. (332 aa)    
Predicted Functional Partners:
Cpap_1211
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: gym:GYMC10_1210 oxidoreductase domain protein.
 
     0.912
Cpap_2800
PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: rcu:RCOM_0276330 hypothetical protein.
 
 
 0.848
Cpap_1212
KEGG: bth:BT_3587 glucosamine-6-phosphate deaminase; PFAM: glucosamine/galactosamine-6-phosphate isomerase.
 
 
  0.786
Cpap_3808
KEGG: sli:Slin_6578 glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.759
Cpap_1166
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: fal:FRAAL0914 3-amino-5-hydroxybenzoic acid synthase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.754
Cpap_1165
Glutamine--scyllo-inositol transaminase; KEGG: dfe:Dfer_3211 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.746
Cpap_2957
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: vcj:VCD_001373 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.721
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
 0.719
Cpap_2799
PFAM: Xylose isomerase domain-containing protein TIM barrel; AP endonuclease 2 domain protein; KEGG: plm:Plim_3264 xylose isomerase domain protein TIM barrel.
 
 
 0.708
Cpap_1208
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ate:Athe_2375 binding-protein-dependent transport systems inner membrane component.
       0.678
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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