STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_1216PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ach:Achl_0779 oxidoreductase domain protein. (337 aa)    
Predicted Functional Partners:
Cpap_2800
PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: rcu:RCOM_0276330 hypothetical protein.
 
 
 0.855
Cpap_3808
KEGG: sli:Slin_6578 glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.771
Cpap_1166
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: fal:FRAAL0914 3-amino-5-hydroxybenzoic acid synthase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.763
Cpap_1165
Glutamine--scyllo-inositol transaminase; KEGG: dfe:Dfer_3211 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.754
Cpap_2957
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: vcj:VCD_001373 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.734
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
  
 0.669
Cpap_2799
PFAM: Xylose isomerase domain-containing protein TIM barrel; AP endonuclease 2 domain protein; KEGG: plm:Plim_3264 xylose isomerase domain protein TIM barrel.
 
 
 0.660
Cpap_1214
KEGG: ate:Athe_2373 two component transcriptional regulator, AraC family; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; Helix-turn-helix, AraC domain.
 
     0.656
Cpap_1917
KEGG: cce:Ccel_0262 UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; Glycosyl transferase, family 4, conserved region; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
 
 0.655
Cpap_3809
PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: gym:GYMC10_4659 xylose isomerase domain protein TIM barrel.
  
 
 0.651
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.