STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_1225KEGG: cth:Cthe_0245 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR. (122 aa)    
Predicted Functional Partners:
Cpap_1891
KEGG: cce:Ccel_0234 cadmium-translocating P-type ATPase; TIGRFAM: cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase.
 
  
 0.896
Cpap_1226
KEGG: dhd:Dhaf_2453 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.697
Cpap_1227
PFAM: protein of unknown function DUF214; KEGG: mru:mru_2206 ABC transporter permease protein.
       0.697
Cpap_1224
KEGG: dal:Dalk_4338 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
       0.533
Cpap_0266
KEGG: cce:Ccel_0746 copper-translocating P-type ATPase; TIGRFAM: copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase.
  
  
 0.510
Cpap_3912
KEGG: cce:Ccel_1144 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SirA-like domain-containing protein; DsrE family protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region; Rhodanese domain protein; SMART: Rhodanese domain protein; Belongs to the sulfur carrier protein TusA family.
  
  
 0.496
Cpap_1223
KEGG: cbe:Cbei_0250 amino acid adenylation domain-containing protein; TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; Non-ribosomal peptide synthetase; phosphopantetheine-binding; Male sterility domain; Belongs to the ATP-dependent AMP-binding enzyme family.
       0.463
Cpap_1892
PFAM: Heavy metal transport/detoxification protein; KEGG: cce:Ccel_0235 heavy metal transport/detoxification protein.
 
   
 0.446
acpP
Phosphopantetheine-binding protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
       0.422
Cpap_1221
PFAM: AMP-dependent synthetase and ligase; KEGG: cth:Cthe_1232 AMP-dependent synthetase and ligase.
       0.408
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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