STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_1301PFAM: protein of unknown function DUF402; KEGG: cce:Ccel_0817 protein of unknown function DUF402. (160 aa)    
Predicted Functional Partners:
Cpap_1949
KEGG: cce:Ccel_0277 fibronectin type III domain protein; PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein.
  
     0.750
Cpap_0634
Hypothetical protein; Manually curated; KEGG: cce:Ccel_2046 hypothetical protein.
  
     0.749
Cpap_1909
KEGG: cce:Ccel_0254 hypothetical protein.
  
     0.728
Cpap_3645
KEGG: cce:Ccel_1448 tetratricopeptide TPR_2.
  
     0.728
Cpap_1019
KEGG: cce:Ccel_0429 PKD domain containing protein; PFAM: PKD domain containing protein; SMART: PKD domain containing protein.
  
     0.696
Cpap_0239
KEGG: cce:Ccel_0718 hypothetical protein.
  
     0.694
Cpap_2105
KEGG: cce:Ccel_0024 AAA ATPase central domain protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase.
 
     0.688
Cpap_2901
KEGG: cce:Ccel_1977 hypothetical protein.
  
     0.682
Cpap_3208
KEGG: cce:Ccel_1698 hypothetical protein; Belongs to the UPF0342 family.
  
     0.670
Cpap_0021
KEGG: ere:EUBREC_0045 hypothetical protein.
  
     0.669
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.