STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_1467KEGG: cce:Ccel_3311 hypothetical protein. (69 aa)    
Predicted Functional Partners:
Cpap_1466
KEGG: cth:Cthe_2100 AbrB family transcriptional regulator; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain-containing protein.
       0.773
Cpap_1465
Hypothetical protein; KEGG: rno:474348 SCO-spondin.
       0.668
Cpap_1468
Hypothetical protein; KEGG: ngr:NAEGRDRAFT_82166 ankyrin repeat domain-containing protein.
       0.588
Cpap_1469
Phage-like protein; Manually curated; KEGG: clj:CLJU_c31640 phage-like protein.
       0.474
Cpap_1470
KEGG: bbe:BBR47_35700 hypothetical protein.
       0.474
Cpap_1471
KEGG: ctc:CTC02139 hypothetical protein.
       0.447
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.