STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_1469Phage-like protein; Manually curated; KEGG: clj:CLJU_c31640 phage-like protein. (676 aa)    
Predicted Functional Partners:
Cpap_1476
SMART: beta-lactamase domain protein; KEGG: clj:CLJU_c31620 putative phage-like hydrolase.
 
    0.878
Cpap_1470
KEGG: bbe:BBR47_35700 hypothetical protein.
 
     0.836
Cpap_1471
KEGG: ctc:CTC02139 hypothetical protein.
 
     0.804
scpA
Chromosome segregation and condensation protein ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.803
Cpap_2063
PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein; KEGG: cce:Ccel_0394 inosine 5-monophosphate dehydrogenase; SMART: CBS domain containing protein.
 
  0.755
cinA
TIGRFAM: competence/damage-inducible protein CinA; molybdenum cofactor synthesis domain protein; PFAM: CinA domain protein; molybdopterin binding domain; KEGG: cce:Ccel_0674 competence/damage-inducible protein CinA; SMART: molybdopterin binding domain.
    
  0.717
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
   
 
 0.693
Cpap_2277
KEGG: cce:Ccel_0221 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; CHASE3 domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein.
    
  0.678
Cpap_3864
KEGG: gwc:GWCH70_1221 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein.
    
  0.678
Cpap_1468
Hypothetical protein; KEGG: ngr:NAEGRDRAFT_82166 ankyrin repeat domain-containing protein.
       0.613
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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