STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_1485KEGG: mxa:MXAN_3455 hypothetical protein. (135 aa)    
Predicted Functional Partners:
Cpap_1480
KEGG: vvy:VVA0798 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
       0.773
Cpap_1481
KEGG: cbk:CLL_A1940 hypothetical protein.
       0.773
Cpap_1482
KEGG: aoe:Clos_1054 hypothetical protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase.
       0.773
Cpap_1483
KEGG: ppw:PputW619_2157 hypothetical protein.
       0.773
Cpap_1484
KEGG: cbi:CLJ_B2548 hypothetical protein.
       0.773
Cpap_1478
KEGG: wbr:WGLp122 hypothetical protein.
       0.545
Cpap_1479
KEGG: cce:Ccel_0056 single-strand binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n.
       0.545
Cpap_1486
PFAM: endodeoxyribonuclease RusA; KEGG: ere:EUBREC_2127 hypothetical protein.
       0.529
Cpap_1487
Hypothetical protein; KEGG: tle:Tlet_0478 DNA-directed RNA polymerase, beta' subunit.
       0.529
Cpap_1488
Hypothetical protein; KEGG: ppd:Ppro_3817 radical SAM domain-containing protein.
       0.447
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.