STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_1493PFAM: protein of unknown function DUF437; KEGG: bbe:BBR47_35580 hypothetical protein. (161 aa)    
Predicted Functional Partners:
Cpap_1492
PFAM: Gp37Gp68 family protein; KEGG: hmo:HM1_0038 phage GP37/gp68, putative.
       0.781
Cpap_1494
KEGG: ckl:CKL_4011 hypothetical protein.
       0.773
Cpap_1495
KEGG: bcr:BCAH187_A2223 YopX protein.
       0.727
Cpap_1489
KEGG: pkn:PKH_010840 hypothetical protein.
       0.718
Cpap_1490
KEGG: cdu:CD36_17080 RING finger protein, putative.
       0.718
Cpap_1491
KEGG: sbi:SORBI_04g017500 hypothetical protein.
       0.718
Cpap_1488
Hypothetical protein; KEGG: ppd:Ppro_3817 radical SAM domain-containing protein.
       0.676
Cpap_1486
PFAM: endodeoxyribonuclease RusA; KEGG: ere:EUBREC_2127 hypothetical protein.
  
    0.595
Cpap_1487
Hypothetical protein; KEGG: tle:Tlet_0478 DNA-directed RNA polymerase, beta' subunit.
       0.562
Cpap_3951
KEGG: cce:Ccel_1181 hypothetical protein.
  
     0.529
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.