STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_1500KEGG: bxe:Bxe_A3103 hypothetical protein. (132 aa)    
Predicted Functional Partners:
Cpap_1501
PFAM: phosphoadenosine phosphosulfate reductase; KEGG: pis:Pisl_1809 hypothetical protein.
       0.628
Cpap_1497
PFAM: protein of unknown function DUF1599; KEGG: cbb:CLD_2308 hypothetical protein.
       0.601
Cpap_1498
KEGG: ctc:CTC02141 hypothetical protein.
       0.601
Cpap_1499
KEGG: cby:CLM_2546 hypothetical protein.
       0.601
Cpap_1496
KEGG: lmh:LMHCC_2579 hypothetical protein.
       0.585
Cpap_0067
KEGG: bbe:BBR47_29580 hypothetical protein.
  
     0.547
Cpap_1274
Phage portal protein, HK97 family; KEGG: lin:lin2578 hypothetical protein; TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein.
  
     0.507
Cpap_1275
PFAM: Terminase; KEGG: afl:Aflv_0661 phage terminase, large subunit.
  
     0.489
Cpap_1502
Hypothetical protein; KEGG: bge:BC1002_1201 putative transposase protein.
       0.421
Cpap_1820
KEGG: cth:Cthe_2968 4Fe-4S ferredoxin, iron-sulfur binding.
  
     0.409
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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