STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_1534KEGG: ctp:CTRG_00729 hypothetical protein. (193 aa)    
Predicted Functional Partners:
Cpap_1533
KEGG: gka:GK0545 hypothetical protein.
       0.773
Cpap_1532
Hypothetical protein; KEGG: spi:MGAS10750_Spy0884 phage protein.
       0.757
Cpap_1535
KEGG: pop:POPTR_573398 hypothetical protein.
       0.737
Cpap_1531
KEGG: gka:GK0542 hypothetical protein.
       0.716
Cpap_1536
Hypothetical protein; KEGG: abu:Abu_0975 putative lytic murein transglycosylase.
       0.711
Cpap_1537
KEGG: pyo:PY01757 hypothetical protein.
       0.711
Cpap_1530
KEGG: ddi:DDB_G0288217 hypothetical protein.
       0.692
Cpap_1529
KEGG: ppa:PAS_chr3_1246 hypothetical protein.
       0.633
Cpap_1528
Hypothetical protein; KEGG: azc:AZC_3233 putative outer membrane autotransporter barrel.
       0.467
Cpap_1527
Hypothetical protein; KEGG: der:Dere_GG11910 GG11910 gene product from transcript GG11910-RA.
       0.436
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.