STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_1654PFAM: amino acid-binding ACT domain protein; KEGG: cce:Ccel_0670 amino acid-binding ACT domain protein. (143 aa)    
Predicted Functional Partners:
Cpap_1653
Phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
   0.898
Cpap_1652
PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: cce:Ccel_0668 indolepyruvate oxidoreductase subunit beta.
 
    0.773
Cpap_1651
Indolepyruvate ferredoxin oxidoreductase, alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
 
    0.764
Cpap_3144
Phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
   0.721
Cpap_3578
Phenylacetate--CoA ligase; KEGG: cce:Ccel_1392 coenzyme F390 synthetase; PFAM: AMP-dependent synthetase and ligase.
 
   0.706
Cpap_1380
KEGG: cth:Cthe_2792 phenylacetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase.
 
   0.645
Cpap_3575
Indolepyruvate ferredoxin oxidoreductase, alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
 
    0.604
Cpap_3576
PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: cce:Ccel_1390 pyruvate ferredoxin/flavodoxin oxidoreductase.
 
    0.604
Cpap_2691
PFAM: AMP-dependent synthetase and ligase; KEGG: neu:NE0796 capsular polysaccharide biosynthesis protein CapK.
 
   0.600
Cpap_0097
TIGRFAM: proposed homoserine kinase; phosphonopyruvate decarboxylase-related protein; KEGG: cce:Ccel_2140 proposed homoserine kinase; PFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; metalloenzyme domain protein.
  
  
  0.589
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
Server load: medium (74%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.