STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_1688KEGG: cce:Ccel_1653 hypothetical protein. (317 aa)    
Predicted Functional Partners:
Cpap_2750
KEGG: amr:AM1_0870 hypothetical protein.
  
    0.644
Cpap_3124
PFAM: Abortive infection protein; KEGG: cce:Ccel_1776 abortive infection protein.
  
     0.608
Cpap_1687
PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: cce:Ccel_1654 site-specific tyrosine recombinase XerC; Belongs to the 'phage' integrase family.
       0.550
Cpap_1689
PFAM: NLP/P60 protein; KEGG: cce:Ccel_1652 NLP/P60 protein.
       0.503
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.