STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_1694PFAM: glycoside hydrolase family 9; type 3a cellulose-binding domain protein; Dockerin type 1; KEGG: cce:Ccel_1648 glycoside hydrolase family 9. (962 aa)    
Predicted Functional Partners:
Cpap_0254
PFAM: glycoside hydrolase family 9; Carbohydrate-binding CenC domain protein; Dockerin type 1; KEGG: cce:Ccel_0732 glycoside hydrolase family 9.
  
 0.846
Cpap_0945
PFAM: lipolytic protein G-D-S-L family; KEGG: cce:Ccel_2162 lipolytic protein G-D-S-L family.
 
 0.714
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
    
  0.706
Cpap_1788
Mannan endo-1,4-beta-mannosidase; KEGG: cce:Ccel_1551 glycoside hydrolase family 26; PFAM: Dockerin type 1; Belongs to the glycosyl hydrolase 26 family.
  
  
  0.692
cinA
TIGRFAM: competence/damage-inducible protein CinA; molybdenum cofactor synthesis domain protein; PFAM: CinA domain protein; molybdopterin binding domain; KEGG: cce:Ccel_0674 competence/damage-inducible protein CinA; SMART: molybdopterin binding domain.
    
  0.674
Cpap_3849
PFAM: glycoside hydrolase family 5; Dockerin type 1; KEGG: cce:Ccel_1099 glycoside hydrolase family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
0.669
Cpap_0252
PFAM: glycoside hydrolase family 8; Dockerin type 1; KEGG: cce:Ccel_0730 glycoside hydrolase family 8; Belongs to the glycosyl hydrolase 8 (cellulase D) family.
  
   
 0.666
Cpap_2043
TIGRFAM: beta-galactosidase; KEGG: cce:Ccel_0374 beta-galactosidase; PFAM: glycoside hydrolase family 1.
     
 0.660
Cpap_2901
KEGG: cce:Ccel_1977 hypothetical protein.
  
     0.652
Cpap_1695
PFAM: Spore coat protein CotH; Carbohydrate-binding CenC domain protein; KEGG: bfr:BF1549 hypothetical protein.
 
   
 0.638
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
Server load: medium (78%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.