STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_1789KEGG: cce:Ccel_1550 glycoside hydrolase family 18; PFAM: glycoside hydrolase family 18; Dockerin type 1; SMART: chitinase II; Belongs to the glycosyl hydrolase 18 family. (474 aa)    
Predicted Functional Partners:
Cpap_2048
PFAM: coagulation factor 5/8 type domain protein; protein of unknown function DUF291; Dockerin type 1; glycoside hydrolase family 5; KEGG: cce:Ccel_0379 protein of unknown function DUF291.
 
 
0.931
Cpap_0775
PFAM: FAD dependent oxidoreductase; Rieske [2Fe-2S] iron-sulphur domain; KEGG: cce:Ccel_2448 FAD dependent oxidoreductase.
   
 0.802
Cpap_2336
PFAM: glycosyltransferase 36; glycosyltransferase 36 associated; carbohydrate binding; KEGG: cce:Ccel_3412 glycosyltransferase 36.
   
 
 0.744
Cpap_3401
PFAM: glycoside hydrolase family 8; Dockerin type 1; KEGG: cce:Ccel_1298 glycoside hydrolase family 8.
    
0.744
Cpap_2846
PFAM: glycoside hydrolase family 5; Dockerin type 1; KEGG: cce:Ccel_0840 glycoside hydrolase family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
0.710
Cpap_1885
PFAM: glycoside hydrolase family 3 domain protein; KEGG: dhd:Dhaf_1089 glycoside hydrolase family 3 domain protein.
   
 
 0.701
Cpap_2339
PFAM: glycoside hydrolase family 3 domain protein; KEGG: cce:Ccel_3410 glycoside hydrolase family 3 domain protein.
  
 
 0.690
Cpap_0769
PFAM: glycoside hydrolase family 3 domain protein; KEGG: cce:Ccel_2454 glycoside hydrolase family 3 domain protein; Belongs to the glycosyl hydrolase 3 family.
  
 
 0.669
Cpap_2297
PFAM: glycoside hydrolase family 3 domain protein; KEGG: cce:Ccel_0203 glycoside hydrolase family 3 domain protein.
   
 
 0.620
Cpap_3651
KEGG: cce:Ccel_1454 hypothetical protein.
    
 0.617
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.