STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_1828KEGG: llm:llmg_1670 putative ketosteroid isomerase. (128 aa)    
Predicted Functional Partners:
Cpap_2813
Succinate dehydrogenase; KEGG: clj:CLJU_c08670 putative reductase flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein.
  
 
  0.510
Cpap_1827
KEGG: pjd:Pjdr2_2342 hypothetical protein.
       0.482
Cpap_0080
Putative polyketide synthase; Manually curated; KEGG: bbe:BBR47_39880 putative polyketide synthase.
 
  
  0.474
Cpap_0010
Manually curated; KEGG: cpi:Cpin_5290 erythronolide synthase, 6-methylsalicylic acid synthase; PFAM: Beta-ketoacyl synthase; KR domain protein; phosphopantetheine-binding.
 
  
  0.458
Cpap_0003
6-deoxyerythronolide-B synthase; Manually curated; KEGG: bbe:BBR47_39870 putative mixed polyketide synthase/non-ribosomal peptide synthetase; PFAM: Beta-ketoacyl synthase; phosphopantetheine-binding.
 
  
  0.417
Cpap_0079
Mycocerosate synthase., 6-deoxyerythronolide-B synthase; KEGG: bsu:BSU17200 polyketide synthase; PFAM: Beta-ketoacyl synthase; phosphopantetheine-binding; KR domain protein; Methyltransferase type 12.
 
  
  0.414
Cpap_0011
KEGG: bsu:BSU17200 polyketide synthase; manually curated; PFAM: Beta-ketoacyl synthase; Methyltransferase type 12; phosphopantetheine-binding; KR domain protein.
 
  
  0.411
Cpap_0009
Beta-ketoacyl synthase; KEGG: bbe:BBR47_39870 putative mixed polyketide synthase/non-ribosomal peptide synthetase; manually curated; PFAM: Beta-ketoacyl synthase; phosphopantetheine-binding; KR domain protein.
 
  
  0.407
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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