STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_1855PFAM: Heptaprenyl diphosphate synthase component I; KEGG: cce:Ccel_1525 heptaprenyl diphosphate synthase component I. (178 aa)    
Predicted Functional Partners:
Cpap_1856
PFAM: protein of unknown function DUF1312; KEGG: cce:Ccel_1524 protein of unknown function DUF1312.
 
    0.974
Cpap_1854
PFAM: Polyprenyl synthetase; KEGG: cce:Ccel_1526 polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
 
 
 0.955
Cpap_1857
ApbE family lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
   
 0.946
Cpap_3878
PFAM: protein of unknown function DUF1312; KEGG: cce:Ccel_1114 protein of unknown function DUF1312.
 
    0.886
Cpap_2999
PFAM: Polyprenyl synthetase; KEGG: cce:Ccel_1902 polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
  
 
 0.852
Cpap_3879
PFAM: Heptaprenyl diphosphate synthase component I; KEGG: cce:Ccel_1115 heptaprenyl diphosphate synthase component I.
  
  
 
0.845
Cpap_1858
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; DoxX family protein; KEGG: cth:Cthe_0560 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
     0.787
Cpap_3721
PFAM: Polyprenyl synthetase; KEGG: ton:TON_0137 bifunctional short-chain isoprenyl diphosphate synthase.
  
 
 0.781
Cpap_3881
ApbE family lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
   
 0.743
Cpap_3722
Hypothetical protein; KEGG: mif:Metin_0789 polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
  
 
 0.656
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.