STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_1886Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (520 aa)    
Predicted Functional Partners:
Cpap_3046
Amino acid carrier protein; KEGG: ere:EUBREC_3173 sodium/alanine symporter; TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter.
  
  
 0.825
Cpap_2348
PFAM: iron-containing alcohol dehydrogenase; Aldehyde Dehydrogenase; KEGG: cpe:CPE2531 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.675
Cpap_2505
PFAM: iron-containing alcohol dehydrogenase; Aldehyde Dehydrogenase; KEGG: cce:Ccel_3198 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.675
Cpap_3283
PFAM: acyl-CoA reductase; KEGG: cac:CA_C2287 acyl-CoA reductase LuxC.
  
 
 0.642
Cpap_0712
PFAM: sodium:neurotransmitter symporter; KEGG: cce:Ccel_2498 sodium:neurotransmitter symporter.
 
  
 0.538
Cpap_1885
PFAM: glycoside hydrolase family 3 domain protein; KEGG: dhd:Dhaf_1089 glycoside hydrolase family 3 domain protein.
       0.537
Cpap_2671
PFAM: Citrate synthase; KEGG: cce:Ccel_2571 citrate synthase; Belongs to the citrate synthase family.
   
  
 0.518
Cpap_2373
Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; KEGG: cbe:Cbei_0361 multi-sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein.
   
 
 0.506
Cpap_2375
KEGG: cce:Ccel_3383 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein.
   
 
 0.506
Cpap_2544
Purine operon repressor, PurR; KEGG: cce:Ccel_3095 pur operon repressor; TIGRFAM: pur operon repressor; PFAM: purine repressor; phosphoribosyltransferase.
   
  
 0.499
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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