node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
hpf | rplI | Cpap_2039 | Cpap_2152 | Sigma 54 modulation protein/ribosomal protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | Ribosomal protein L9; Binds to the 23S rRNA. | 0.921 |
hpf | rplO | Cpap_2039 | Cpap_1349 | Sigma 54 modulation protein/ribosomal protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.922 |
hpf | rpmA | Cpap_2039 | Cpap_3428 | Sigma 54 modulation protein/ribosomal protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | KEGG: cce:Ccel_1322 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.929 |
hpf | rpmC | Cpap_2039 | Cpap_1360 | Sigma 54 modulation protein/ribosomal protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | KEGG: cce:Ccel_0766 50S ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | 0.944 |
hpf | rpsB | Cpap_2039 | Cpap_1037 | Sigma 54 modulation protein/ribosomal protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | Ribosomal protein S2; KEGG: cce:Ccel_0442 30S ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.924 |
hpf | rpsE | Cpap_2039 | Cpap_1351 | Sigma 54 modulation protein/ribosomal protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.922 |
hpf | rpsI | Cpap_2039 | Cpap_1331 | Sigma 54 modulation protein/ribosomal protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | PFAM: ribosomal protein S9; KEGG: cce:Ccel_0795 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.928 |
hpf | rpsL | Cpap_2039 | Cpap_1988 | Sigma 54 modulation protein/ribosomal protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.920 |
hpf | rpsP | Cpap_2039 | Cpap_0225 | Sigma 54 modulation protein/ribosomal protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | KEGG: cce:Ccel_0710 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.922 |
hpf | rpsU | Cpap_2039 | Cpap_0683 | Sigma 54 modulation protein/ribosomal protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | KEGG: cce:Ccel_2094 30S ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | 0.933 |
rplI | hpf | Cpap_2152 | Cpap_2039 | Ribosomal protein L9; Binds to the 23S rRNA. | Sigma 54 modulation protein/ribosomal protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | 0.921 |
rplI | rplO | Cpap_2152 | Cpap_1349 | Ribosomal protein L9; Binds to the 23S rRNA. | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.995 |
rplI | rpmA | Cpap_2152 | Cpap_3428 | Ribosomal protein L9; Binds to the 23S rRNA. | KEGG: cce:Ccel_1322 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.995 |
rplI | rpmC | Cpap_2152 | Cpap_1360 | Ribosomal protein L9; Binds to the 23S rRNA. | KEGG: cce:Ccel_0766 50S ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | 0.993 |
rplI | rpsB | Cpap_2152 | Cpap_1037 | Ribosomal protein L9; Binds to the 23S rRNA. | Ribosomal protein S2; KEGG: cce:Ccel_0442 30S ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.995 |
rplI | rpsE | Cpap_2152 | Cpap_1351 | Ribosomal protein L9; Binds to the 23S rRNA. | Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.993 |
rplI | rpsI | Cpap_2152 | Cpap_1331 | Ribosomal protein L9; Binds to the 23S rRNA. | PFAM: ribosomal protein S9; KEGG: cce:Ccel_0795 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.995 |
rplI | rpsL | Cpap_2152 | Cpap_1988 | Ribosomal protein L9; Binds to the 23S rRNA. | Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.988 |
rplI | rpsP | Cpap_2152 | Cpap_0225 | Ribosomal protein L9; Binds to the 23S rRNA. | KEGG: cce:Ccel_0710 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.994 |
rplI | rpsU | Cpap_2152 | Cpap_0683 | Ribosomal protein L9; Binds to the 23S rRNA. | KEGG: cce:Ccel_2094 30S ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | 0.967 |