STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_2088TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: cce:Ccel_0008 ParB-like partition protein; SMART: ParB domain protein nuclease; Belongs to the ParB family. (281 aa)    
Predicted Functional Partners:
Cpap_2087
KEGG: cce:Ccel_0007 cobyrinic acid ac-diamide synthase.
 
 
 0.992
Cpap_0882
KEGG: ctc:CTC01937 sporulation initiation inhibitor soj family protein.
 
 
 0.967
Cpap_3717
KEGG: cpy:Cphy_3935 cobyrinic acid ac-diamide synthase.
 
 
 0.967
Cpap_2072
TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: cce:Ccel_3483 ParB-like partition protein; SMART: ParB domain protein nuclease; Belongs to the ParB family.
 
   
0.817
Cpap_1580
PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: cce:Ccel_0601 cell divisionFtsK/SpoIIIE.
  
  
 0.768
Cpap_0847
Cell division protein FtsK/SpoIIIE; KEGG: mfl:Mfl100 DNA translocase (stage III sporulation protein E); PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase.
  
  
 0.751
rsmG
Methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.737
Cpap_2089
KEGG: cce:Ccel_0009 hypothetical protein.
  
 
 0.694
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
 
  
 0.675
Cpap_0851
KEGG: bcz:pE33L466_0231 hypothetical protein.
    
 
 0.651
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.