STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_2185KEGG: cce:Ccel_0116 hypothetical protein. (371 aa)    
Predicted Functional Partners:
Cpap_2186
KEGG: cce:Ccel_0117 hypothetical protein.
       0.752
Cpap_2183
PFAM: type II secretion system protein E; KEGG: cce:Ccel_0114 type II secretion system protein E.
       0.692
Cpap_2184
KEGG: cce:Ccel_0115 hypothetical protein.
       0.692
Cpap_2187
KEGG: cce:Ccel_0118 hypothetical protein.
       0.674
Cpap_2188
KEGG: cce:Ccel_0119 hypothetical protein.
       0.651
Cpap_2181
KEGG: cce:Ccel_0112 SAF domain protein; PFAM: SAF domain protein; SMART: SAF domain protein.
       0.594
Cpap_2182
KEGG: cce:Ccel_0113 hypothetical protein.
       0.594
Cpap_2189
KEGG: cce:Ccel_0120 hypothetical protein.
       0.590
Cpap_2180
KEGG: cce:Ccel_0111 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain.
       0.565
Cpap_2190
KEGG: cce:Ccel_0121 hypothetical protein.
       0.547
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.