STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpap_2280PFAM: amine oxidase; KEGG: mhu:Mhun_2065 FAD dependent oxidoreductase. (471 aa)    
Predicted Functional Partners:
Cpap_0394
PFAM: phosphoesterase PA-phosphatase related; KEGG: cce:Ccel_2878 hypothetical protein.
  
 
 0.885
Cpap_0281
Hypothetical protein; KEGG: cce:Ccel_0862 beta-ketoacyl synthase.
  
 
 0.786
Cpap_2279
PFAM: Transcription regulator PadR-like; transcriptional regulator PadR family protein; KEGG: clj:CLJU_c16040 putative PadR family transcriptional regulator.
 
     0.751
Cpap_3718
KEGG: bbe:BBR47_39880 putative polyketide synthase; PFAM: Beta-ketoacyl synthase; KR domain protein; phosphopantetheine-binding.
  
 
 0.724
Cpap_0003
6-deoxyerythronolide-B synthase; Manually curated; KEGG: bbe:BBR47_39870 putative mixed polyketide synthase/non-ribosomal peptide synthetase; PFAM: Beta-ketoacyl synthase; phosphopantetheine-binding.
    
 0.548
Cpap_3704
PFAM: AMP-dependent synthetase and ligase; condensation domain protein; KEGG: cce:Ccel_0864 amino acid adenylation domain protein.
    
 0.548
Cpap_3716
KEGG: cce:Ccel_0862 beta-ketoacyl synthase; PFAM: KR domain protein; Beta-ketoacyl synthase; phosphopantetheine-binding.
    
 0.548
Cpap_0465
KEGG: mla:Mlab_1324 phosphate transporter.
  
     0.546
Cpap_0010
Manually curated; KEGG: cpi:Cpin_5290 erythronolide synthase, 6-methylsalicylic acid synthase; PFAM: Beta-ketoacyl synthase; KR domain protein; phosphopantetheine-binding.
    
 0.545
Cpap_3122
PFAM: amine oxidase; KEGG: cce:Ccel_1778 amine oxidase.
  
  
 0.527
Your Current Organism:
Ruminiclostridium papyrosolvens DSM 2782
NCBI taxonomy Id: 588581
Other names: Clostridium papyrosolvens DSM 2782, R. papyrosolvens DSM 2782
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